Module 12
Detecting invalid sequences
Finding sequences with unexpected characters.
Finding problems
You can detect sequences that contain characters other than A, T, G, or C.
def is_valid(seq):
return all(base in "ATGC" for base in seq)
seqs = ["ATGC", "ATGX", "GGGG"]
for s in seqs:
print(s, is_valid(s))Your task
Detect invalid
- Check which sequences are valid.